STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4191PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: gbe:GbCGDNIH1_1383 blasticidin-S deaminase. (147 aa)    
Predicted Functional Partners:
Noca_4190
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll8574 hypothetical protein.
 
   
 0.935
Noca_3535
KEGG: sma:SAV3365 putative thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase, family 3; Pyrimidine nucleoside phosphorylase, C-terminal domain.
  
 
 0.932
Noca_2321
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cgb:cg0397 probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family.
 
  
 0.918
Noca_2919
PFAM: thymidine kinase; KEGG: sco:SCO5845 putative thimidine kinase.
    
 0.916
Noca_3531
Uridine kinase; KEGG: sma:SAV3350 ATP-binding protein.
    
 0.910
Noca_1299
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sco:SCO2015 putative nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.906
Noca_2322
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cjk:jk1043 putative extracellular nuclease.
    
 0.906
Noca_1242
TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sco:SCO2843 putative N-acetylglucosamine-6-phosphate deacetylase; Belongs to the HAD-like hydrolase superfamily.
     
  0.900
Noca_3537
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
     
  0.900
Noca_4193
PFAM: inner-membrane translocator; KEGG: cya:CYA_1582 carbohydrate ABC transporter-2 (CUT2) family, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.836
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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