STRINGSTRING
Noca_4201 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4201" - Helix-turn-helix domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4201Helix-turn-helix domain-containing protein (128 aa)    
Predicted Functional Partners:
Noca_4200
Hypothetical protein (231 aa)
              0.805
Noca_3112
Cyclase/dehydrase (146 aa)
   
          0.749
Noca_0329
Anion-transporting ATPase (342 aa)
   
          0.730
Noca_4229
Hypothetical protein (98 aa)
   
          0.694
Noca_1470
Hypothetical protein (237 aa)
   
          0.653
Noca_0328
Anion-transporting ATPase (402 aa)
   
          0.629
Noca_1273
Amidohydrolase 2 (308 aa)
   
          0.602
atpH
ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (275 aa)
       
      0.592
Noca_4202
Mannose-6-phosphate isomerase (412 aa)
              0.538
Noca_4689
N-acetyltransferase GCN5 (224 aa)
   
          0.532
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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