STRINGSTRING
Noca_4232 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4232" - Putative thioredoxin in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4232Putative thioredoxin (170 aa)    
Predicted Functional Partners:
Noca_4231
Hypothetical protein (161 aa)
 
          0.862
Noca_4233
Hypothetical protein (142 aa)
              0.651
Noca_0257
Hypothetical protein (147 aa)
   
          0.601
Noca_2534
Electron transport protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (119 aa)
   
          0.572
Noca_2350
Hypothetical protein (65 aa)
   
          0.567
Noca_4252
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands (164 aa)
   
          0.542
Noca_3964
Hypothetical protein (322 aa)
   
          0.524
Noca_4229
Hypothetical protein (98 aa)
 
          0.523
Noca_3929
Integral membrane protein (78 aa)
   
          0.502
Noca_1468
ErfK/YbiS/YcfS/YnhG family protein (234 aa)
   
          0.478
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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