STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4232KEGG: fal:FRAAL0941 putative thioredoxin. (170 aa)    
Predicted Functional Partners:
Noca_4231
KEGG: sma:SAV1484 hypothetical protein.
 
     0.896
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.710
Noca_4229
PFAM: protein of unknown function DUF1416; KEGG: fra:Francci3_0450 protein of unknown function DUF1416.
 
     0.694
Noca_4230
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_4529 thiosulfate sulfurtransferase.
    
 0.666
Noca_2575
KEGG: sma:SAV6479 hypothetical protein.
  
     0.656
Noca_4233
KEGG: lxx:Lxx09000 hypothetical protein.
       0.558
Noca_3170
KEGG: rha:RHA1_ro07229 hypothetical protein.
   
 0.543
Noca_3811
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 
 0.536
Noca_3024
PFAM: electron transport protein SCO1/SenC; KEGG: fra:Francci3_2499 electron transport protein SCO1/SenC.
  
 
 0.531
Noca_1471
KEGG: sco:SCO1819 integral membrane protein.
  
     0.513
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.