STRINGSTRING
Noca_4237 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4237" - Peptidase S26B, signal peptidase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4237Peptidase S26B, signal peptidase (185 aa)    
Predicted Functional Partners:
Noca_4236
Hypothetical protein (272 aa)
              0.859
Noca_1685
Peptidase S26B, signal peptidase (638 aa)
         
    0.800
Noca_1239
Peptidase S24, S26A and S26B (203 aa)
   
          0.754
Noca_4238
Hypothetical protein (170 aa)
              0.697
Noca_4413
GDSL family lipase (266 aa)
   
          0.444
Noca_4403
Hypothetical protein (809 aa)
   
          0.428
Noca_1111
Hypothetical protein (328 aa)
   
          0.419
Noca_4239
Sulfur transfer protein ThiS (90 aa)
              0.413
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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