STRINGSTRING
Noca_4242 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4242" - MMPL domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4242MMPL domain-containing protein (842 aa)    
Predicted Functional Partners:
Noca_4243
Hypothetical protein (286 aa)
 
          0.881
Noca_4241
Hypothetical protein (132 aa)
              0.859
Noca_4244
TetR family transcriptional regulator (212 aa)
              0.601
Noca_3671
Chlorite dismutase (240 aa)
   
          0.464
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
     
      0.438
Noca_2997
Acyltransferase 3 (409 aa)
     
   
  0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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