STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4243KEGG: sma:SAV1712 hypothetical protein. (286 aa)    
Predicted Functional Partners:
Noca_4242
PFAM: MMPL domain protein; KEGG: fal:FRAAL1424 putative integral membrane export protein.
 
     0.836
Noca_4241
Hypothetical protein.
       0.773
Noca_1776
KEGG: sco:SCO4438 integral membrane protein.
 
   
 0.770
Noca_4244
PFAM: regulatory protein, TetR; KEGG: fra:Francci3_1551 transcriptional regulator, TetR family.
       0.508
Noca_1531
PFAM: major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_A1561 light regulation of gametogenesis6 protein.
  
     0.424
Noca_3656
PFAM: MMPL domain protein; KEGG: rha:RHA1_ro04933 membrane efflux protein.
 
     0.415
Noca_4247
PFAM: MMPL domain protein; KEGG: rha:RHA1_ro04933 membrane efflux protein.
 
     0.413
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.