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Noca_4245 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4245" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4245Regulatory protein TetR (221 aa)    
Predicted Functional Partners:
Noca_4246
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein (316 aa)
              0.676
Noca_2169
EmrB/QacA family drug resistance transporter (554 aa)
 
          0.514
Noca_0773
Major facilitator transporter (518 aa)
 
          0.484
Noca_0270
Major facilitator transporter (497 aa)
 
          0.484
Noca_0809
Regulatory protein TetR (200 aa)
   
          0.479
Noca_0140
TetR family transcriptional regulator (182 aa)
   
          0.449
Noca_1827
Regulatory protein TetR (196 aa)
   
          0.421
Noca_4349
EmrB/QacA family drug resistance transporter (493 aa)
              0.408
Noca_3502
EmrB/QacA family drug resistance transporter (474 aa)
              0.408
Noca_0136
EmrB/QacA family drug resistance transporter (504 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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