STRINGSTRING
Noca_4253 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4253" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4253Hypothetical protein (118 aa)    
Predicted Functional Partners:
Noca_4254
Hypothetical protein (823 aa)
              0.703
Noca_4252
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands (164 aa)
              0.674
Noca_3130
Hypothetical protein (208 aa)
   
          0.599
Noca_4058
Pyridoxamine 5’-phosphate oxidase-like protein (184 aa)
   
          0.595
Noca_4250
Glycine cleavage T protein (aminomethyl transferase) (324 aa)
              0.556
Noca_4251
FUR family nickel uptake regulator (139 aa)
              0.543
Noca_0938
GDSL family lipase (348 aa)
   
          0.520
Noca_2998
Hypothetical protein (1342 aa)
   
          0.497
Noca_2999
Type 11 methyltransferase (246 aa)
   
          0.489
Noca_2308
Hypothetical protein (86 aa)
   
          0.488
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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