STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4282PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro04374 reductase. (403 aa)    
Predicted Functional Partners:
Noca_4280
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04376 probable aromatic ring dioxygenase.
 
 
 0.988
Noca_2552
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sco:SCO1923 putative dioxygenase ferredoxin subunit.
 
 
 0.953
Noca_0832
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0300 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.916
Noca_2134
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro01381 possible ferredoxin--NAD(+) reductase.
  
  
 
0.916
Noca_3355
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sco:SCO7117 ferredoxin reductase.
  
  
 
0.910
Noca_4283
Assimilatory nitrite reductase (NAD(P)H) small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04373 probable dioxygenase ferredoxin component.
 
  
 0.889
Noca_4281
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro04375 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
  
 0.784
Noca_0122
Alkane 1-monooxygenase; PFAM: Rubredoxin-type Fe(Cys)4 protein; fatty acid desaturase; KEGG: nfa:nfa46180 putative alkane-1-monooxygenase.
 
 
 0.682
Noca_3022
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sco:SCO2026 putative glutamate synthase large subunit.
  
  
 0.642
Noca_0831
PFAM: ferredoxin; KEGG: bmb:BruAb1_1031 ferredoxin, 2Fe-2S.
 
  
 0.625
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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