STRINGSTRING
Noca_4285 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4285" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4285Hypothetical protein (289 aa)    
Predicted Functional Partners:
Noca_4284
Putative coenzyme PQQ synthesis protein (254 aa)
              0.647
Noca_0988
UspA domain-containing protein (304 aa)
   
          0.500
Noca_3309
Peroxiredoxins-like protein (192 aa)
   
          0.499
Noca_1296
Major facilitator transporter (406 aa)
   
          0.487
Noca_4490
GDSL family lipase (299 aa)
   
          0.475
Noca_4286
Hypothetical protein (260 aa)
              0.472
Noca_4279
Gamma-glutamyltransferase (519 aa)
 
          0.461
Noca_2778
Acetaldehyde dehydrogenase (44 aa)
   
          0.458
Noca_4608
Na+/solute symporter (547 aa)
 
          0.432
Noca_4283
Rieske (2Fe-2S) domain-containing protein (108 aa)
              0.431
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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