Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4285PFAM: protein of unknown function DUF1275; KEGG: bli:BL00156 conserved membrane protein YoaK. (289 aa)    
Predicted Functional Partners:
Noca_4284
KEGG: rha:RHA1_ro04372 possible coenzyme PQQ synthesis protein.
 
     0.737
Noca_2447
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.458
Noca_4283
Assimilatory nitrite reductase (NAD(P)H) small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04373 probable dioxygenase ferredoxin component.
 
     0.453
Noca_4076
Hypothetical protein; KEGG: ade:Adeh_0244 LigA.
  
     0.441
Noca_4286
Hypothetical protein.
       0.425
Noca_4190
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll8574 hypothetical protein.
 
     0.421
Noca_4279
Gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03; PFAM: gamma-glutamyltranspeptidase; KEGG: rha:RHA1_ro04377 probable gamma-glutamyltransferase.
       0.409
Noca_4274
KEGG: rha:RHA1_ro04368 hypothetical protein.
 
     0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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