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Noca_4313 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4313" - VanW protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4313VanW protein (363 aa)    
Predicted Functional Partners:
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
   
 
  0.995
Noca_4454
Dehydrogenase, E1 component (726 aa)
   
 
  0.983
Noca_3367
Branched chain amino acid aminotransferase (357 aa)
   
 
  0.838
Noca_2367
Class IV aminotransferase (274 aa)
   
 
  0.835
Noca_1737
Alpha-ketoglutarate decarboxylase (1263 aa)
   
 
  0.815
Noca_0279
Glutamate synthase (ferredoxin) (539 aa)
 
 
  0.716
Noca_4508
Transketolase, central region (326 aa)
   
 
  0.714
Noca_0635
4Fe-4S ferredoxin (544 aa)
   
 
  0.702
Noca_4509
Pyruvate dehydrogenase (398 aa)
   
 
  0.701
Noca_4143
methylmalonyl-CoA mutase large subunit (1043 aa)
 
     
  0.683
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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