STRINGSTRING
Noca_4322 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4322" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4322Major facilitator transporter (418 aa)    
Predicted Functional Partners:
Noca_4321
ArsR family transcriptional regulator (200 aa)
 
          0.819
Noca_4320
Hypothetical protein (119 aa)
              0.648
Noca_4682
Hypothetical protein (735 aa)
   
          0.632
Noca_3278
Major facilitator transporter (415 aa)
   
          0.623
Noca_3586
Hypothetical protein (609 aa)
   
          0.593
Noca_2344
N-acetyltransferase GCN5 (234 aa)
   
          0.584
Noca_0189
LuxR family transcriptional regulator (340 aa)
   
          0.556
Noca_4290
ATPase domain-containing protein (315 aa)
   
          0.527
Noca_1711
Hypothetical protein (283 aa)
   
          0.518
Noca_3958
Hypothetical protein (118 aa)
   
          0.515
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (37%) [HD]