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Noca_4349 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4349" - EmrB/QacA family drug resistance transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4349EmrB/QacA family drug resistance transporter (493 aa)    
Predicted Functional Partners:
Noca_4348
Hypothetical protein (160 aa)
              0.658
lysS
lysyl-tRNA synthetase (516 aa)
              0.596
Noca_3374
MarR family transcriptional regulator (159 aa)
 
     
  0.520
Noca_4170
MarR family transcriptional regulator (147 aa)
         
  0.442
Noca_3927
Regulatory protein MarR (156 aa)
         
  0.442
Noca_2051
Regulatory protein MarR (164 aa)
         
  0.442
Noca_1870
Regulatory protein MarR (158 aa)
         
  0.442
Noca_1801
Regulatory protein MarR (162 aa)
         
  0.442
Noca_1370
Regulatory protein MarR (164 aa)
         
  0.442
Noca_1297
Regulatory protein MarR (157 aa)
         
  0.442
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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