node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noca_1367 | Noca_3052 | Noca_1367 | Noca_3052 | KEGG: pac:PPA1638 putative ABC transporter. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.857 |
Noca_1367 | Noca_4352 | Noca_1367 | Noca_4352 | KEGG: pac:PPA1638 putative ABC transporter. | PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tfu:Tfu_2449 tRNA/rRNA methyltransferase. | 0.625 |
Noca_1367 | rplC | Noca_1367 | Noca_3905 | KEGG: pac:PPA1638 putative ABC transporter. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.803 |
Noca_1367 | rplK | Noca_1367 | Noca_0696 | KEGG: pac:PPA1638 putative ABC transporter. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.892 |
Noca_1367 | rplM | Noca_1367 | Noca_0889 | KEGG: pac:PPA1638 putative ABC transporter. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.828 |
Noca_1367 | rplO | Noca_1367 | Noca_3886 | KEGG: pac:PPA1638 putative ABC transporter. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.891 |
Noca_1367 | rplU | Noca_1367 | Noca_3451 | KEGG: pac:PPA1638 putative ABC transporter. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.847 |
Noca_1367 | rplX | Noca_1367 | Noca_3894 | KEGG: pac:PPA1638 putative ABC transporter. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.802 |
Noca_1367 | rsfS | Noca_1367 | Noca_1821 | KEGG: pac:PPA1638 putative ABC transporter. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.819 |
Noca_3052 | Noca_1367 | Noca_3052 | Noca_1367 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | KEGG: pac:PPA1638 putative ABC transporter. | 0.857 |
Noca_3052 | Noca_4352 | Noca_3052 | Noca_4352 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tfu:Tfu_2449 tRNA/rRNA methyltransferase. | 0.650 |
Noca_3052 | pheT | Noca_3052 | Noca_2466 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sma:SAV6743 putative phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.632 |
Noca_3052 | rplC | Noca_3052 | Noca_3905 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.915 |
Noca_3052 | rplK | Noca_3052 | Noca_0696 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.890 |
Noca_3052 | rplM | Noca_3052 | Noca_0889 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.902 |
Noca_3052 | rplO | Noca_3052 | Noca_3886 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.915 |
Noca_3052 | rplU | Noca_3052 | Noca_3451 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.928 |
Noca_3052 | rplX | Noca_3052 | Noca_3894 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.890 |
Noca_3052 | rsfS | Noca_3052 | Noca_1821 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.915 |
Noca_4352 | Noca_1367 | Noca_4352 | Noca_1367 | PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tfu:Tfu_2449 tRNA/rRNA methyltransferase. | KEGG: pac:PPA1638 putative ABC transporter. | 0.625 |