STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4370KEGG: nfa:nfa29530 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Noca_4371
KEGG: nfa:nfa24570 hypothetical protein.
 
     0.941
Noca_4373
KEGG: nfa:nfa24590 hypothetical protein.
 
   
 0.884
Noca_4372
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro01522 short chain dehydrogenase.
 
     0.845
Noca_0302
KEGG: nfa:nfa48960 hypothetical protein.
 
     0.749
Noca_4417
PFAM: nuclear transport factor 2; KEGG: mpa:MAP0541c hypothetical protein.
  
     0.736
Noca_2731
PFAM: luciferase family protein; KEGG: rha:RHA1_ro04686 probable 5,10-methylenetetrahydromethanopterin reductase.
  
     0.729
Noca_2683
PFAM: luciferase family protein; KEGG: nfa:nfa22130 putative monooxygenase.
  
     0.698
Noca_4369
KEGG: mmc:Mmcs_2007 hypothetical protein.
 
     0.667
Noca_4065
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3213 luciferase-like protein.
  
     0.651
Noca_0813
PFAM: luciferase family protein; KEGG: sma:SAV6641 FMN-dependent monooxygenase.
  
     0.644
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.