Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4376KEGG: tfu:Tfu_2504 putative integral membrane protein. (250 aa)    
Predicted Functional Partners:
Noca_4375
PFAM: cytochrome P450; KEGG: mtc:MT0342 P450 heme-thiolate protein.
       0.593
Noca_2302
PFAM: dihydrodipicolinate reductase; NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: nfa:nfa16890 putative epimerase.
  
    0.538
Noca_3759
Sodium/proton antiporter, CPA1 family; PFAM: sodium/hydrogen exchanger; KEGG: rha:RHA1_ro01570 Na+/H+ antiporter; TC 2.A.36.
 
 
 
 0.533
Noca_4377
PFAM: Sucraseferredoxin family protein; KEGG: rha:RHA1_ro03455 hypothetical protein.
       0.515
Noca_4378
PFAM: Cupin 4 family protein; KEGG: mmc:Mmcs_5250 cupin 4.
       0.515
Noca_4379
KEGG: pfa:PFI1205c hypothetical protein.
       0.515
Noca_2056
PFAM: cation efflux protein; KEGG: cgb:cg2271 Co/Zn/Cd efflux system component.
 
 0.499
Noca_1918
PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rha:RHA1_ro06437 hypothetical protein.
   
    0.434
Noca_4411
PFAM: FAD-binding 9, siderophore-interacting domain protein; KEGG: cgb:cg0767 siderophore-interacting protein.
   
    0.434
Noca_4380
PFAM: Sucraseferredoxin family protein; KEGG: nfa:nfa9080 hypothetical protein.
       0.430
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.