STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4377PFAM: Sucraseferredoxin family protein; KEGG: rha:RHA1_ro03455 hypothetical protein. (303 aa)    
Predicted Functional Partners:
Noca_4378
PFAM: Cupin 4 family protein; KEGG: mmc:Mmcs_5250 cupin 4.
 
     0.896
Noca_4379
KEGG: pfa:PFI1205c hypothetical protein.
       0.773
Noca_4380
PFAM: Sucraseferredoxin family protein; KEGG: nfa:nfa9080 hypothetical protein.
 
    
0.680
Noca_4376
KEGG: tfu:Tfu_2504 putative integral membrane protein.
       0.515
Noca_4381
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cef:CE1938 putative coenzyme PQQ synthesis protein.
       0.443
Noca_1540
KEGG: sco:SCO4525 hypothetical protein.
  
     0.425
Noca_4375
PFAM: cytochrome P450; KEGG: mtc:MT0342 P450 heme-thiolate protein.
       0.402
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.