STRINGSTRING
Noca_4380 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4380" - Sucraseferredoxin family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4380Sucraseferredoxin family protein (284 aa)    
Predicted Functional Partners:
Noca_4378
Cupin 4 family protein (403 aa)
 
          0.853
Noca_4377
Sucraseferredoxin family protein (303 aa)
 
       
0.743
Noca_4379
Hypothetical protein (74 aa)
              0.703
Noca_4381
Radical SAM domain-containing protein (381 aa)
              0.619
Noca_0676
Hypothetical protein (170 aa)
   
          0.582
Noca_1924
ANTAR domain-containing protein (248 aa)
   
          0.520
Noca_1564
LmbE family protein (249 aa)
   
          0.506
Noca_4376
Putative integral membrane protein (250 aa)
              0.482
Noca_1540
Hypothetical protein (268 aa)
   
          0.443
Noca_2858
Hypothetical protein (402 aa)
   
          0.433
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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