STRINGSTRING
Noca_4388 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4388" - Nitroreductase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4388Nitroreductase (211 aa)    
Predicted Functional Partners:
Noca_3103
Flavin reductase domain-containing protein (167 aa)
   
          0.666
Noca_2220
SAF domain-containing protein (224 aa)
   
          0.662
Noca_4387
Allantoate amidohydrolase (394 aa)
              0.660
Noca_4386
N-formimino-L-glutamate deiminase (430 aa)
              0.660
hutI
Imidazolonepropionase (391 aa)
              0.660
Noca_2221
Hypothetical protein (279 aa)
   
          0.655
Noca_2232
Putative atp/GTP-binding protein (299 aa)
   
          0.650
Noca_4390
Major facilitator transporter (491 aa)
              0.630
Noca_4389
Hypothetical protein (440 aa)
              0.630
Noca_3130
Hypothetical protein (208 aa)
   
          0.628
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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