STRINGSTRING
Noca_4403 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4403" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4403Hypothetical protein (809 aa)    
Predicted Functional Partners:
Noca_4402
Regulatory proteins IclR (256 aa)
              0.669
Noca_4435
Hypothetical protein (481 aa)
   
          0.666
Noca_4401
Hypothetical protein (118 aa)
              0.655
Noca_2801
Hypothetical protein (73 aa)
   
          0.624
Noca_0266
Lipoprotein (234 aa)
   
          0.623
Noca_2220
SAF domain-containing protein (224 aa)
   
          0.545
Noca_4404
Hypothetical protein (1033 aa)
              0.536
Noca_2224
Type II secretion system protein (303 aa)
   
          0.529
Noca_2831
Hemerythrin HHE cation binding domain-containing protein (184 aa)
   
          0.507
Noca_0109
Hypothetical protein (797 aa)
   
          0.503
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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