STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4409KEGG: rha:RHA1_ro02601 hypothetical protein. (274 aa)    
Predicted Functional Partners:
Noca_4408
KEGG: fra:Francci3_2434 hypothetical protein.
 
     0.919
Noca_3607
PFAM: ATP-binding region, ATPase domain protein domain protein; PspC domain protein; KEGG: sma:SAV3471 two-component system sensor kinase.
  
  
 0.758
Noca_4410
Hypothetical protein.
       0.668
Noca_1062
PFAM: protein of unknown function DUF1707; KEGG: sma:SAV5183 hypothetical protein.
  
  
 0.614
Noca_2827
PFAM: protein of unknown function DUF1707; KEGG: tfu:Tfu_0460 hypothetical protein.
  
  
 0.614
Noca_3608
PFAM: PspC domain protein; KEGG: sma:SAV3472 hypothetical protein.
 
  
 0.552
Noca_4516
PFAM: membrane protein of unknown function; KEGG: sma:SAV4271 hypothetical protein.
  
  
 0.545
Noca_0967
PFAM: PspC domain protein; KEGG: sco:SCO4903 hypothetical protein.
  
  
 0.487
Noca_4358
PFAM: pentapeptide repeat protein; KEGG: fra:Francci3_2300 pentapeptide repeat.
 
 
   0.461
Noca_3152
PFAM: PspA/IM30 family protein; KEGG: sco:SCO2168 putative phage shock protein A.
  
  
 0.453
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.