STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4411PFAM: FAD-binding 9, siderophore-interacting domain protein; KEGG: cgb:cg0767 siderophore-interacting protein. (120 aa)    
Predicted Functional Partners:
dcd
dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.703
Noca_0906
KEGG: sma:SAV2206 hypothetical protein.
  
     0.609
Noca_4606
PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO4151 acetyltransferase.
  
     0.585
Noca_4041
Hypothetical protein; KEGG: fal:FRAAL6457 putative integral membrane protein.
  
     0.559
Noca_2615
PFAM: CHAP domain containing protein; KEGG: cch:Cag_1920 hypothetical protein.
  
     0.536
Noca_4413
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: lxx:Lxx11940 hypothetical protein.
       0.524
Noca_3344
KEGG: bcn:Bcen_5567 hypothetical protein.
 
     0.483
Noca_4529
PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; KEGG: sco:SCO2117 anthranilate synthase.
  
  
 0.457
Noca_1408
KEGG: fal:FRAAL1258 hypothetical protein; putative signal peptide.
  
     0.433
Noca_4527
PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: nfa:nfa16010 putative para-aminobenzoate synthase.
  
  
 0.432
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.