STRINGSTRING
Noca_4417 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4417" - Nuclear transport factor 2 in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4417Nuclear transport factor 2 (150 aa)    
Predicted Functional Partners:
Noca_2519
Hypothetical protein (100 aa)
   
          0.776
Noca_2518
Rieske (2Fe-2S) domain-containing protein (398 aa)
   
          0.776
Noca_4371
Hypothetical protein (383 aa)
   
          0.773
Noca_2774
Glyoxalase/bleomycin resistance protein/dioxygenase (300 aa)
   
          0.771
Noca_0302
Hypothetical protein (163 aa)
   
          0.770
Noca_4370
Hypothetical protein (284 aa)
 
          0.758
Noca_2789
Hypothetical protein (177 aa)
 
          0.758
Noca_4373
Hypothetical protein (386 aa)
   
          0.756
Noca_2732
Hypothetical protein (319 aa)
 
          0.748
Noca_0927
Hypothetical protein (341 aa)
   
          0.748
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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