Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4417PFAM: nuclear transport factor 2; KEGG: mpa:MAP0541c hypothetical protein. (150 aa)    
Predicted Functional Partners:
Noca_3954
PFAM: nuclear transport factor 2; KEGG: rha:RHA1_ro03609 steroid delta-isomerase.
 
  
 0.957
Noca_2780
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro04532 3-ketosteroid-delta-1-dehydrogenase.
 
  
  0.953
Noca_2786
KEGG: nfa:nfa4530 lipid-transfer protein.
  
  
  0.939
Noca_3693
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro05813 probable 3-oxosteroid 1-dehydrogenase.
 
  
  0.939
Noca_2732
PFAM: protein of unknown function DUF35; KEGG: nfa:nfa5230 hypothetical protein.
 
     0.810
Noca_2733
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
     0.797
Noca_2518
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04538 ketosteroid-9-alpha-hydroxylase, oxygenase.
 
     0.774
Noca_0302
KEGG: nfa:nfa48960 hypothetical protein.
 
    0.772
Noca_0426
PFAM: dihydrodipicolinate reductase; KEGG: rha:RHA1_ro02530 hypothetical protein.
  
     0.768
Noca_2789
KEGG: nfa:nfa4510 hypothetical protein.
 
     0.768
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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