STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4423PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sma:SAV5251 two-component system sensor kinase. (449 aa)    
Predicted Functional Partners:
Noca_4422
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV5250 two-component system response regulator.
   0.961
Noca_1670
PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: mag:amb3735 signal transduction histidine kinase.
  
 
 0.921
Noca_1977
KEGG: mca:MCA1204 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.849
Noca_3826
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV5250 two-component system response regulator.
   0.834
Noca_4421
KEGG: fra:Francci3_3736 conserved hypothetical protein.
     
 0.781
Noca_1240
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV3481 two-component system response regulator.
 
   0.698
Noca_4428
Oxidoreductase; KEGG: sma:SAV5486 oxidoreductase.
 
     0.693
Noca_4046
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO4230 putative response regulator.
 
   0.692
Noca_1613
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro08549 response regulator, two-component system.
 
   0.687
Noca_1610
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro08012 response regulator, two-component system.
 
   0.680
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.