STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4428Oxidoreductase; KEGG: sma:SAV5486 oxidoreductase. (63 aa)    
Predicted Functional Partners:
Noca_4426
KEGG: fal:FRAAL3950 hypothetical protein; putative membrane protein.
 
     0.943
Noca_4425
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.887
Noca_4427
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sco:SCP1.160c putative oxidoreductase.
 
   
 0.853
Noca_4424
KEGG: mlo:mlr0587 hypothetical glycine-rich protein.
       0.773
Noca_3832
KEGG: fra:Francci3_2588 hypothetical protein.
  
     0.771
Noca_3830
PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: fra:Francci3_2586 putative integral membrane protein.
 
     0.717
Noca_4423
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sma:SAV5251 two-component system sensor kinase.
 
     0.693
Noca_4421
KEGG: fra:Francci3_3736 conserved hypothetical protein.
 
     0.627
Noca_4422
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV5250 two-component system response regulator.
       0.564
Noca_3829
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.492
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.