Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4428Oxidoreductase; KEGG: sma:SAV5486 oxidoreductase. (63 aa)    
Predicted Functional Partners:
Noca_4426
KEGG: fal:FRAAL3950 hypothetical protein; putative membrane protein.
 
     0.943
Noca_4425
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.886
Noca_4427
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sco:SCP1.160c putative oxidoreductase.
 
   
 0.850
Noca_4424
KEGG: mlo:mlr0587 hypothetical glycine-rich protein.
       0.773
Noca_3832
KEGG: fra:Francci3_2588 hypothetical protein.
  
     0.771
Noca_0537
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tfu:Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
     
 0.725
Noca_3830
PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: fra:Francci3_2586 putative integral membrane protein.
 
     0.717
Noca_4423
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sma:SAV5251 two-component system sensor kinase.
 
     0.693
Noca_4421
KEGG: fra:Francci3_3736 conserved hypothetical protein.
 
     0.626
Noca_1772
KEGG: sma:SAV1912 putative methylmalonyl-CoA mutase, coenzyme B12-dependent alpha subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
      
 0.618
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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