STRINGSTRING
Noca_4433 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4433" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4433Hypothetical protein (278 aa)    
Predicted Functional Partners:
Noca_4434
Short-chain dehydrogenase/reductase SDR (316 aa)
              0.856
Noca_4432
Lysine exporter protein LysE/YggA (200 aa)
              0.840
Noca_4266
Hypothetical protein (350 aa)
   
          0.752
Noca_3123
Hypothetical protein (424 aa)
   
          0.751
Noca_3958
Hypothetical protein (118 aa)
   
          0.745
Noca_1468
ErfK/YbiS/YcfS/YnhG family protein (234 aa)
   
          0.737
Noca_4417
Nuclear transport factor 2 (150 aa)
   
          0.728
Noca_0927
Hypothetical protein (341 aa)
   
          0.717
Noca_0266
Lipoprotein (234 aa)
   
          0.692
Noca_3127
Hypothetical protein (88 aa)
   
          0.687
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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