STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4433KEGG: mbo:Mb3126c hypothetical protein. (278 aa)    
Predicted Functional Partners:
Noca_4434
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb0069 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.787
Noca_4432
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: xcv:XCV3263 L-lysine exporter family protein.
       0.757
Noca_1771
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sco:SCO5386 anti-sigma factor antagonist.
  
     0.614
Noca_4431
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sco:SCO7307 chromosome replication initiation inhibitor protein; Belongs to the LysR transcriptional regulatory family.
       0.544
Noca_2297
Hypothetical protein.
  
     0.525
Noca_0109
KEGG: sco:SCO1740 hypothetical protein.
  
     0.523
Noca_0320
KEGG: sma:SAV4558 hypothetical protein.
  
     0.514
Noca_3463
KEGG: sco:SCO2609 rod shape-determining protein.
  
     0.506
Noca_0436
KEGG: pca:Pcar_1759 hypothetical protein.
  
     0.490
Noca_4548
PFAM: ribonuclease BN; KEGG: mpa:MAP1682c hypothetical protein.
  
     0.480
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.