STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4436PFAM: aldo/keto reductase; KEGG: ecj:JW1403 predicted oxidoreductase, NAD(P)-binding. (274 aa)    
Predicted Functional Partners:
Noca_4006
KEGG: rxy:Rxyl_0612 pyridoxal kinase; TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; Belongs to the pyridoxine kinase family.
    
 0.903
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.902
Noca_2622
PFAM: aldo/keto reductase; KEGG: sma:SAV6640 oxidoreductase.
  
     0.687
Noca_3154
PFAM: aldo/keto reductase; KEGG: mxa:MXAN_6482 oxidoreductase, aldo/keto reductase family.
  
     0.659
Noca_3749
PFAM: aldo/keto reductase; KEGG: tfu:Tfu_1674 putative oxidoreductase.
  
     0.578
Noca_2688
PFAM: aldo/keto reductase; KEGG: sco:SCO7356 oxidoreductase.
 
 
0.577
Noca_1416
PFAM: aldo/keto reductase; KEGG: bja:blr1124 oxidoreductase.
  
     0.559
Noca_4435
KEGG: nfa:nfa44140 hypothetical protein.
       0.552
Noca_0880
PFAM: aldo/keto reductase; KEGG: tfu:Tfu_2293 oxidoreductase.
  
     0.522
Noca_3576
TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: bcn:Bcen_2859 MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.462
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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