STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4446KEGG: sco:SCO3957 possible integral membrane protein. (303 aa)    
Predicted Functional Partners:
Noca_4445
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3956 putative ABC transporter ATP-binding protein.
 
 
 0.971
Noca_4447
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4248 putative ABC transporter ATP-binding protein.
 
 
 0.971
Noca_4448
KEGG: sco:SCO3959 possible integral membrane protein.
 
     0.962
Noca_4444
PFAM: FAD dependent oxidoreductase; KEGG: ana:all3744 probable phytoene dehydrogenase.
       0.668
Noca_1540
KEGG: sco:SCO4525 hypothetical protein.
  
     0.620
Noca_1778
Hypothetical protein; KEGG: lbl:LBL_1155 plastocyanin.
  
 
 0.547
Noca_0320
KEGG: sma:SAV4558 hypothetical protein.
  
     0.542
Noca_1021
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1436 ABC-type multidrug transport system ATPase component.
 
 
 0.468
Noca_4449
Hypothetical protein.
       0.451
Noca_2621
KEGG: sma:SAV6637 hypothetical protein.
  
     0.448
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.