STRINGSTRING
Noca_4450 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4450" - Sigma-70 region 4 domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4450Sigma-70 region 4 domain-containing protein (300 aa)    
Predicted Functional Partners:
Noca_0758
Flagellar motor switch protein FliG (341 aa)
 
   
  0.945
Noca_0761
Flagellar basal-body rod protein (130 aa)
 
 
  0.943
Noca_0745
Flagellar motor switch protein FliN (246 aa)
 
   
  0.943
Noca_0756
FliI/YscN family ATPase (435 aa)
 
 
  0.935
Noca_0769
Flagellar hook-associated protein FlgK (466 aa)
 
   
  0.934
Noca_0751
Hypothetical protein (282 aa)
 
   
  0.933
Noca_0759
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction (531 aa)
 
   
  0.928
Noca_0766
Flagellin domain-containing protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (376 aa)
 
   
  0.927
Noca_0765
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (443 aa)
 
   
  0.920
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system (266 aa)
 
   
  0.912
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (17%) [HD]