Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4456Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bxe:Bxe_C0293 transcriptional regulator, GntR family. (213 aa)    
Predicted Functional Partners:
Noca_4455
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cps:CPS_3057 glyoxalase family protein.
 
   
 0.880
Noca_4457
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mag:amb1303 aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homolog.
       0.783
Noca_4458
PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bja:blr6047 putative oxidoreductase protein.
  
    0.779
Noca_1422
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mta:Moth_0073 transcriptional regulator, GntR family.
  
     0.773
Noca_2132
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_4384 GntR-like protein.
 
  
 0.750
Noca_4063
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mta:Moth_2304 GntR-like.
 
  
 0.739
Noca_4454
PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; KEGG: bme:BMEII0061 2-oxoisovalerate dehydrogenase alpha and beta subunit.
 
     0.697
Noca_4459
KEGG: rha:RHA1_ro03794 hypothetical protein.
 
    0.670
Noca_0850
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sco:SCO7702 GntR-family transcriptional regulator.
 
  
 0.624
Noca_0841
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bha:BH3167 transcriptional regulator (GntR family).
 
  
 0.602
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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