STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4460PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro01058 NADPH:quinone reductase. (319 aa)    
Predicted Functional Partners:
Noca_4461
KEGG: nfa:nfa44070 hypothetical protein.
       0.645
Noca_4459
KEGG: rha:RHA1_ro03794 hypothetical protein.
     
 0.607
Noca_4455
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cps:CPS_3057 glyoxalase family protein.
  
 
 0.531
Noca_2688
PFAM: aldo/keto reductase; KEGG: sco:SCO7356 oxidoreductase.
 
  
 0.477
Noca_4456
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bxe:Bxe_C0293 transcriptional regulator, GntR family.
  
    0.465
Noca_4458
PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bja:blr6047 putative oxidoreductase protein.
     
 0.460
Noca_4457
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mag:amb1303 aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homolog.
       0.456
Noca_4099
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: ava:Ava_4427 zinc-containing alcohol dehydrogenase superfamily.
 
  
 0.444
Noca_4453
PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: gbe:GbCGDNIH1_1185 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.427
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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