STRINGSTRING
Noca_4463 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4463" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4463Major facilitator transporter (449 aa)    
Predicted Functional Partners:
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.753
Noca_4606
N-acetyltransferase GCN5 (308 aa)
   
          0.747
Noca_2220
SAF domain-containing protein (224 aa)
   
          0.747
Noca_2224
Type II secretion system protein (303 aa)
   
          0.743
Noca_1271
Peptidase S1 and S6, chymotrypsin/Hap (280 aa)
   
          0.741
Noca_2221
Hypothetical protein (279 aa)
   
          0.739
Noca_0451
N-acetyltransferase GCN5 (382 aa)
   
          0.724
Noca_2227
TadE family protein (152 aa)
   
          0.717
Noca_2223
Type II secretion system protein (310 aa)
   
          0.710
Noca_0109
Hypothetical protein (797 aa)
   
          0.703
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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