Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4480PFAM: fatty acid desaturase; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase). (409 aa)    
Predicted Functional Partners:
Noca_4481
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa46020 putative oxidoreductase.
 
 0.997
Noca_3668
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa46020 putative oxidoreductase.
 
 0.992
Noca_3667
PFAM: fatty acid desaturase; KEGG: rha:RHA1_ro01720 probable fatty acid desaturase.
  
  
 
0.904
Noca_3767
PFAM: fatty acid desaturase; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase).
  
  
 
0.901
Noca_4482
KEGG: fra:Francci3_3797 hypothetical protein.
 
     0.845
Noca_0122
Alkane 1-monooxygenase; PFAM: Rubredoxin-type Fe(Cys)4 protein; fatty acid desaturase; KEGG: nfa:nfa46180 putative alkane-1-monooxygenase.
 
  
 0.615
Noca_3850
KEGG: abo:ABO_1590 hypothetical protein.
  
    0.574
Noca_2520
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa50680 putative oxidoreductase.
 
  
 0.519
Noca_1657
Transcriptional regulator, CdaR family; KEGG: fra:Francci3_3797 hypothetical protein.
 
     0.489
Noca_1730
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1257 transcriptional regulator, TetR family.
  
  
 0.485
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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