Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4481PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa46020 putative oxidoreductase. (384 aa)    
Predicted Functional Partners:
Noca_4480
PFAM: fatty acid desaturase; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase).
 
 0.997
Noca_3667
PFAM: fatty acid desaturase; KEGG: rha:RHA1_ro01720 probable fatty acid desaturase.
 
 0.992
Noca_3767
PFAM: fatty acid desaturase; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase).
 
 0.992
Noca_3668
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa46020 putative oxidoreductase.
 
  
0.923
Noca_4482
KEGG: fra:Francci3_3797 hypothetical protein.
 
    0.864
Noca_2555
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: fra:Francci3_1665 SUF system FeS assembly protein.
  
 0.814
Noca_0635
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa50890 putative ferredoxin reductase.
   
 0.703
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.668
Noca_4577
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro01415 2,4-dienoyl-CoA reductase (NADPH).
 
 0.655
Noca_3142
Cysteine desulfurase; PFAM: aminotransferase, class V; KEGG: sco:SCO2157 aminotransferase.
  
 0.647
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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