STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4487Carbohydrate ABC transporter membrane protein 2, CUT1 family; KEGG: sco:SCO0533 putative sugar transporter membrane protein; TC 3.A.1.1.-. (61 aa)    
Predicted Functional Partners:
Noca_4486
PFAM: glycoside hydrolase, family 3 domain protein; KEGG: sco:SCO5235 sugar hydrolase.
 
   
 0.835
Noca_4484
PFAM: amidohydrolase; KEGG: rxy:Rxyl_0658 N-acetylglucosamine-6-phosphate deacetylase.
     
 0.799
Noca_4483
TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: rha:RHA1_ro01547 glucosamine-6-phosphate deaminase.
     
 0.798
Noca_4485
PFAM: ROK family protein; KEGG: blo:BL1341 possible sugar kinase.
     
 0.788
Noca_1063
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sco:SCO4240 ABC transporter ATP-binding protein; TC 3.A.1.1.-.
  
 
 0.763
Noca_3680
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2417 ABC transporter related; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
  
 
 0.763
Noca_3683
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2420 extracellular solute-binding protein, family 1; TC 3.A.1.1.-.
 
 
 0.702
Noca_0870
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 putative sugar ABC transporter, permease protein; TC 3.A.1.1.-.
  
 
 0.700
Noca_0060
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease; TC 3.A.1.1.-.
  
 
 0.671
Noca_0869
PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMb21221 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; TC 3.A.1.1.-.
  
 
 0.661
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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