STRINGSTRING
Noca_4488 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4488" - ROK family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4488ROK family protein (374 aa)    
Predicted Functional Partners:
Noca_4484
N-acetylglucosamine 6-phosphate deacetylase (318 aa)
 
   
  0.905
Noca_0868
ROK family protein (400 aa)
   
          0.776
Noca_4483
Glucosamine-6-phosphate isomerase (261 aa)
 
 
 
  0.769
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (298 aa)
   
 
  0.708
Noca_0085
Dihydrodipicolinate synthetase (310 aa)
   
 
  0.708
Noca_0033
Dihydrodipicolinate synthetase (305 aa)
   
 
  0.708
Noca_2539
Glucose-6-phosphate isomerase (555 aa)
       
  0.703
Noca_1427
Hypothetical protein (342 aa)
       
  0.703
Noca_4485
ROK family protein (305 aa)
 
       
0.662
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
         
  0.620
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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