STRINGSTRING
Noca_4489 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4489" - Cation diffusion facilitator family transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4489Cation diffusion facilitator family transporter (298 aa)    
Predicted Functional Partners:
Noca_4490
GDSL family lipase (299 aa)
              0.638
Noca_4488
ROK family protein (374 aa)
              0.526
Noca_1427
Hypothetical protein (342 aa)
 
          0.507
Noca_1509
UvrD/REP helicase (1073 aa)
   
        0.493
Noca_1508
UvrD/REP helicase (1060 aa)
   
        0.493
Noca_1425
Phosphomannomutase (469 aa)
   
        0.480
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (230 aa)
   
        0.447
Noca_2522
Beta-lactamase domain-containing protein (230 aa)
 
     
  0.447
Noca_0511
Na+/H+ antiporter (624 aa)
 
        0.437
Noca_4529
Anthranilate synthase component I/chorismate-binding protein (666 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]