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Noca_4497 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4497" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4497ABC transporter-like protein (314 aa)    
Predicted Functional Partners:
Noca_4498
Hypothetical protein (272 aa)
 
          0.976
Noca_1322
Hypothetical protein (271 aa)
 
          0.847
Noca_1321
Hypothetical protein (270 aa)
 
          0.846
Noca_1022
Hypothetical protein (265 aa)
 
          0.838
Noca_0121
ABC transporter (252 aa)
 
  0.832
Noca_2544
ABC transporter (265 aa)
   
  0.786
Noca_1483
ABC transporter (269 aa)
 
  0.786
Noca_0479
ABC transporter (245 aa)
 
  0.786
Noca_4496
Protein kinase (488 aa)
   
 
  0.712
Noca_2543
Cytochrome oxidase assembly (305 aa)
 
   
    0.698
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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