Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4497PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1436 ABC-type multidrug transport system ATPase component. (314 aa)    
Predicted Functional Partners:
Noca_4498
KEGG: fal:FRAAL6618 hypothetical protein.
 
 
 0.963
Noca_1321
Hypothetical protein.
 
 
 0.846
Noca_1322
Hypothetical protein; KEGG: sco:SCO6361 integral membrane protein.
 
 
 0.846
Noca_1022
Hypothetical protein; KEGG: mmc:Mmcs_0550 putative ABC transporter membrane protein.
 
 
 0.845
Noca_1606
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro03122 ABC lipoprotein transporter, ATP-binding component.
 
   
 0.640
Noca_1607
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6367 ABC transporter ATP-binding protein.
 
   
 0.595
Noca_4499
PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: tfu:Tfu_0455 sigma subunit sigma24 -like protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.588
Noca_1717
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1018 ABC transporter, ATP-binding protein.
 
   
 0.575
Noca_4496
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_0454 tyrosine protein kinase:serine/threonine protein kinase.
  
  
 0.570
Noca_4448
KEGG: sco:SCO3959 possible integral membrane protein.
  
 
 0.537
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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