STRINGSTRING
Noca_4498 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4498" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4498Hypothetical protein (272 aa)    
Predicted Functional Partners:
Noca_4497
ABC transporter-like protein (314 aa)
 
          0.976
Noca_1320
ABC transporter-like protein (300 aa)
 
          0.828
Noca_1319
Histidine kinase, dimerisation and phosphoacceptor region (384 aa)
 
          0.735
Noca_1021
ABC transporter-like protein (298 aa)
 
          0.732
Noca_4499
Sigma-70 region 2 domain-containing protein (188 aa)
              0.662
Noca_1276
Activator of Hsp90 ATPase 1 family protein (153 aa)
   
          0.656
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.647
Noca_4496
Protein kinase (488 aa)
              0.642
Noca_2224
Type II secretion system protein (303 aa)
   
          0.621
Noca_4255
Hypothetical protein (320 aa)
   
          0.601
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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