STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4517PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: tfu:Tfu_2341 protein-tyrosine-phosphatase. (196 aa)    
Predicted Functional Partners:
Noca_4518
PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: tfu:Tfu_2340 hypothetical protein.
     0.973
Noca_4542
KEGG: rha:RHA1_ro01881 possible tyrosine protein phosphatase.
     
 0.946
Noca_4516
PFAM: membrane protein of unknown function; KEGG: sma:SAV4271 hypothetical protein.
       0.850
Noca_4519
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: nfa:nfa49640 putative two-component system response regulator.
     
 0.658
Noca_4520
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rha:RHA1_ro05623 sensor kinase, two-component system.
       0.635
pat
Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
 
     0.634
Noca_2930
PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro11229 possible hydroxyacylglutathione hydrolase.
  
 
 0.623
Noca_2937
PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro11243 hypothetical protein.
  
 
 0.623
Noca_4521
Hypothetical protein.
       0.517
Noca_4515
Hypothetical protein.
       0.500
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.