STRINGSTRING
Noca_4517 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4517" - Protein tyrosine phosphatase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4517Protein tyrosine phosphatase (196 aa)    
Predicted Functional Partners:
Noca_4518
Aminoglycoside phosphotransferase (292 aa)
        0.991
Noca_4185
Lipopolysaccharide biosynthesis protein (473 aa)
   
 
  0.939
Noca_4516
Membrane protein (135 aa)
              0.871
Noca_2935
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (377 aa)
   
 
  0.784
Noca_1445
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (387 aa)
   
 
  0.784
Noca_4520
ATPase domain-containing protein (471 aa)
         
  0.671
Noca_4688
Thioredoxin (108 aa)
   
 
  0.667
Noca_2203
Redoxin domain-containing protein (203 aa)
   
 
  0.667
Noca_2202
Redoxin domain-containing protein (194 aa)
   
 
  0.667
Noca_2076
Redoxin domain-containing protein (169 aa)
   
 
  0.667
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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