Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_4520PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rha:RHA1_ro05623 sensor kinase, two-component system. (471 aa)    
Predicted Functional Partners:
Noca_4519
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: nfa:nfa49640 putative two-component system response regulator.
 
 0.996
Noca_2939
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sth:STH750 two-component response regulator, probably involved in phosphate sensing.
 
 
 0.748
Noca_1748
PFAM: response regulator receiver; KEGG: dsy:DSY2891 hypothetical protein.
 
 
 0.745
Noca_1670
PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: mag:amb3735 signal transduction histidine kinase.
 
 
 0.739
Noca_4046
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO4230 putative response regulator.
 
 
 0.734
Noca_2062
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: fra:Francci3_2401 two component transcriptional regulator, winged helix family.
 
 
 0.731
Noca_2050
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro11203 response regulator, two-component system.
 
 
 0.729
Noca_2006
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO2143 two component system response regulator.
 
 
 0.728
Noca_3261
PFAM: response regulator receiver; KEGG: sco:SCO3741 putative response regulator.
 
 
 0.726
Noca_3782
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro11203 response regulator, two-component system.
 
 
 0.725
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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