STRINGSTRING
Noca_4531 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4531" - Putative helicase protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4531Putative helicase protein (726 aa)    
Predicted Functional Partners:
Noca_4530
Hypothetical protein (150 aa)
              0.563
Noca_1713
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (83 aa)
   
          0.528
Noca_2490
DEAD/DEAH box helicase (865 aa)
 
          0.517
Noca_2669
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (128 aa)
   
          0.490
Noca_4532
enoyl-CoA hydratase (255 aa)
         
  0.475
Noca_4529
Anthranilate synthase component I/chorismate-binding protein (666 aa)
 
          0.473
Noca_3252
Hypothetical protein (102 aa)
   
          0.467
Noca_2298
Hypothetical protein (238 aa)
   
          0.452
Noca_2394
Hypothetical protein (409 aa)
   
          0.448
Noca_3373
GntR family transcriptional regulator (478 aa)
   
          0.427
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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