STRINGSTRING
Noca_4543 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4543" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4543Hypothetical protein (136 aa)    
Predicted Functional Partners:
Noca_0927
Hypothetical protein (341 aa)
   
          0.653
Noca_4266
Hypothetical protein (350 aa)
   
          0.641
Noca_2535
Hypothetical protein (321 aa)
   
          0.594
Noca_4400
Major facilitator transporter (397 aa)
   
          0.586
Noca_2296
RDD domain-containing protein (150 aa)
   
          0.572
Noca_4542
Putative tyrosine protein phosphatase (265 aa)
              0.536
Noca_0276
Hypothetical protein (161 aa)
   
          0.524
Noca_4541
protein-L-isoaspartate(D-aspartate) O-methyltransferase (188 aa)
              0.517
Noca_0999
Hypothetical protein (135 aa)
   
          0.484
Noca_2991
Hypothetical protein (320 aa)
   
          0.455
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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