STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4553PFAM: cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: mpa:MAP1606c hypothetical protein. (161 aa)    
Predicted Functional Partners:
Noca_4556
KEGG: mmc:Mmcs_5394 hypothetical protein.
 
     0.837
Noca_4555
PFAM: protein of unknown function DUF1446; KEGG: nfa:nfa53320 hypothetical protein.
 
     0.807
Noca_4557
PFAM: regulatory protein, TetR; KEGG: sma:SAV3862 TetR-family transcriptional regulator.
 
     0.803
Noca_4552
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: rha:RHA1_ro01931 probable methylcrotonoyl-CoA carboxylase, beta chain.
       0.773
Noca_4554
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa53310 putative acyl-CoA dehydrogenase.
       0.773
Noca_4558
PFAM: RDD domain containing protein; KEGG: mpa:MAP1025 Pra.
       0.520
Noca_4559
Prolyl aminopeptidase 2, Serine peptidase, MEROPS family S33; PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO0805 prolyl aminopeptidase.
       0.508
Noca_3478
PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_4470 hypothetical protein.
  
     0.500
Noca_3573
KEGG: mpa:MAP0443c hypothetical protein.
  
     0.496
Noca_2520
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa50680 putative oxidoreductase.
  
  
 0.484
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.