STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4560PFAM: Phosphoglycerate mutase; KEGG: mxa:MXAN_5898 hypothetical protein. (223 aa)    
Predicted Functional Partners:
Noca_3706
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro08645 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
 
   0.716
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
 
  
 0.610
Noca_3850
KEGG: abo:ABO_1590 hypothetical protein.
 
     0.576
Noca_2892
TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tfu:Tfu_0316 precorrin-3B C17-methyltransferase region:precorrin-2 C20-methyltransferase.
  
  
 0.564
Noca_3409
TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tfu:Tfu_0316 precorrin-3B C17-methyltransferase region:precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.564
fhs
PFAM: formate-tetrahydrofolate ligase, FTHFS; KEGG: gbe:GbCGDNIH1_0047 formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.
       0.551
Noca_4129
PFAM: aminoglycoside phosphotransferase; KEGG: rxy:Rxyl_2337 aminoglycoside phosphotransferase.
 
    0.549
Noca_2917
Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: hch:HCH_04995 short-chain alcohol dehydrogenase-like protein.
 
     0.546
Noca_2860
PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_1217 strictosidine synthase.
 
  
 0.534
Noca_4577
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro01415 2,4-dienoyl-CoA reductase (NADPH).
 
    0.528
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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