STRINGSTRING
Noca_4568 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4568" - CsbD family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4568CsbD family protein (64 aa)    
Predicted Functional Partners:
Noca_4569
FAD dependent oxidoreductase (479 aa)
              0.671
Noca_2384
Hypothetical protein (331 aa)
   
          0.603
Noca_4570
Glutamine amidotransferase (243 aa)
              0.572
Noca_4571
L-carnitine dehydratase/bile acid-inducible protein F (385 aa)
              0.567
Noca_2420
Hypothetical protein (278 aa)
   
          0.536
Noca_4567
DEAD/DEAH box helicase domain-containing protein (507 aa)
              0.506
Noca_0656
Hypothetical protein (299 aa)
   
          0.459
Noca_2830
PA-phosphatase-like phosphoesterase (229 aa)
   
          0.438
Noca_2693
Hypothetical protein (94 aa)
   
          0.420
Noca_4400
Major facilitator transporter (397 aa)
   
          0.417
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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