STRINGSTRING
Noca_4580 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4580" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4580Hypothetical protein (429 aa)    
Predicted Functional Partners:
Noca_4583
Glycosyl transferase family protein (547 aa)
 
          0.947
Noca_4585
Hypothetical protein (330 aa)
 
          0.821
Noca_4582
Hypothetical protein (362 aa)
   
        0.813
Noca_4581
Hypothetical protein (309 aa)
              0.805
Noca_4584
Glycosyl transferase family protein (546 aa)
           
0.785
Noca_3713
NAD-dependent epimerase/dehydratase (306 aa)
   
 
  0.729
Noca_3523
NAD-dependent epimerase/dehydratase (277 aa)
   
 
  0.729
Noca_3305
NAD-dependent epimerase/dehydratase (314 aa)
   
 
  0.729
Noca_2993
NAD-dependent epimerase/dehydratase (346 aa)
   
 
  0.729
Noca_0486
NAD-dependent epimerase/dehydratase (359 aa)
   
 
  0.729
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]