STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4583PFAM: glycosyl transferase, family 2; KEGG: tfu:Tfu_1639 similar to glycosyltransferase. (547 aa)    
Predicted Functional Partners:
Noca_4584
PFAM: glycosyl transferase, family 2; KEGG: dsy:DSY3936 hypothetical protein.
   
 0.942
Noca_4580
Hypothetical protein; KEGG: cac:CAC1615 predicted glycosyltransferase.
   
 0.932
Noca_4585
KEGG: mes:Meso_0486 hypothetical protein.
 
     0.881
Noca_4581
KEGG: rxy:Rxyl_3098 hypothetical protein.
     
 0.786
Noca_4582
KEGG: rxy:Rxyl_3097 hypothetical protein.
       0.776
Noca_4586
Hypothetical protein.
       0.559
Noca_2457
KEGG: tfu:Tfu_1823 hypothetical protein.
  
     0.528
Noca_4076
Hypothetical protein; KEGG: ade:Adeh_0244 LigA.
  
     0.497
Noca_3048
KEGG: tfu:Tfu_0463 hypothetical protein.
  
     0.486
Noca_2905
KEGG: tfu:Tfu_1932 hypothetical protein.
  
    0.479
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.