STRINGSTRING
Noca_4603 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4603" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4603Hypothetical protein (95 aa)    
Predicted Functional Partners:
Noca_4602
Glutamine--fructose-6-phosphate transaminase (610 aa)
 
          0.803
Noca_3958
Hypothetical protein (118 aa)
   
          0.763
Noca_2350
Hypothetical protein (65 aa)
   
          0.650
Noca_4604
Hypothetical protein (90 aa)
              0.629
Noca_2595
Peptidase C60, sortase A and B (213 aa)
   
          0.624
Noca_0488
Hypothetical protein (384 aa)
   
          0.608
Noca_1771
Sulfate transporter/antisigma-factor antagonist STAS (102 aa)
   
          0.587
Noca_0735
Regulatory protein TetR (204 aa)
   
          0.585
Noca_1795
crotonyl-CoA reductase (450 aa)
   
          0.557
Noca_3709
Peptidase S15 (519 aa)
   
          0.553
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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