STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4606PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO4151 acetyltransferase. (308 aa)    
Predicted Functional Partners:
Noca_1362
KEGG: rha:RHA1_ro02307 hypothetical protein.
  
     0.682
Noca_2615
PFAM: CHAP domain containing protein; KEGG: cch:Cag_1920 hypothetical protein.
 
     0.644
Noca_4411
PFAM: FAD-binding 9, siderophore-interacting domain protein; KEGG: cgb:cg0767 siderophore-interacting protein.
  
     0.585
Noca_0488
KEGG: sma:SAV4734 hypothetical protein.
  
    0.572
Noca_4041
Hypothetical protein; KEGG: fal:FRAAL6457 putative integral membrane protein.
  
  
 0.567
Noca_4463
PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV4232 hypothetical protein.
  
     0.567
Noca_1907
Hypothetical protein.
  
     0.565
Noca_1408
KEGG: fal:FRAAL1258 hypothetical protein; putative signal peptide.
  
     0.564
Noca_4605
PFAM: YceI family protein; KEGG: sco:SCO5533 hypothetical protein; Belongs to the UPF0312 family.
  
    0.535
Noca_2336
KEGG: rha:RHA1_ro05054 hypothetical protein.
 
     0.534
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.