STRINGSTRING
Noca_4606 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4606" - N-acetyltransferase GCN5 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4606N-acetyltransferase GCN5 (308 aa)    
Predicted Functional Partners:
Noca_3966
Major facilitator transporter (1075 aa)
   
          0.766
Noca_2699
Hypothetical protein (451 aa)
   
          0.759
Noca_4463
Major facilitator transporter (449 aa)
   
          0.747
Noca_4670
Peptidase S8/S53 subtilisin kexin sedolisin (531 aa)
   
          0.631
Noca_3099
Major facilitator transporter (433 aa)
   
          0.615
Noca_2557
Hypothetical protein (202 aa)
   
          0.597
Noca_1576
Type IV secretory pathway VirD4 components-like protein (453 aa)
   
          0.587
Noca_4605
Hypothetical protein (196 aa)
              0.583
Noca_2220
SAF domain-containing protein (224 aa)
   
          0.573
Noca_4672
Sigma-70 region 2 domain-containing protein (203 aa)
   
          0.552
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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